Role of metagenomics in prospecting novel endoglucanases, accentuating functional metagenomics approach in second-generation biofuel production: a review.

As the fossil fuel reserves are depleting rapidly, there is a need for alternate fuels to meet the day to day mounting energy demands. As fossil fuel started depleting, a quest for alternate forms of fuel was initiated and biofuel is one of its promising outcomes. First-generation biofuels are made from edible sources like vegetable oils, starch, and sugars. Second-generation biofuels (SGB) are derived from lignocellulosic crops and the third-generation involves algae for biofuel production. Technical challenges in the production of SGB are hampering its commercialization. Advanced molecular technologies like metagenomics can help in the discovery of novel lignocellulosic biomass-degrading enzymes for commercialization and industrial production of SGB. This review discusses the metagenomic outcomes to enlighten the importance of unexplored habitats for novel cellulolytic gene mining. It also emphasizes the potential of different metagenomic approaches to explore the uncultivable cellulose-degrading microbiome as well as cellulolytic enzymes associated with them. This review also includes effective pre-treatment technology and consolidated bioprocessing for efficient biofuel production.

Biogenic synthesis of novel platinum-palladium bimetallic nanoparticles from aqueous Annona muricata leaf extract for catalytic activity.

This work reports the fast and effective bio-fabrication of novel platinum-palladium bimetallic nanoparticles (Pt-Pd BNPs) along with their counterparts Pt and Pd monometallic NPs (MNPs) through aqueous Annona muricata leaf extract. The bio-fabrication of the NPs was achieved within 2 h at 100 °C and pH 7 which was established by the occurrence of dark brown color for Pt MNPs and black color for Pd MNPs and Pt-Pd BNPs. NPs were evaluated for their catalytic activity in the reduction of methyl orange (MO), rhodamine-B (rh-B), and methylene blue (MB) textile dyes in presence of sodium borohydride as a reducing agent. Pt-Pd (1:3) BNPs showed higher MO dye degradation (96.84 ± 2.05% in 50 min) followed by Pd MNPs (97.07 ± 1.46% in 60 min), Pt-Pd (3:1) BNPs (97.34 ± 1.17% in 70 min) and Pt-Pd (1:1) BNPs (98.12 ± 1.04% in 80 min). Pd MNPs showed significant catalytic activity in the reduction of rh-B dye by 97.27 ± 1.14% in 12 min followed by Pt-Pd (3:1) BNPs (96.76 ± 2.17% in 18 min), Pt-Pd (1:3) BNPs (96.53 ± 1.97% in 33 min) and Pt-Pd (1:1) BNPs (97.11 ± 2.09% in 39 min). Pt-Pd (1:3) BNPs also showed higher MB dye degradation (96.95 ± 1.57% in 40 min) followed by Pd MNPs (96.22 ± 2.36% in 55 min), Pt-Pd (3:1) BNPs (97.29 ± 1.22% in 75 min) and Pt-Pd (1:1) BNPs (96.45 ± 2.19% in 105 min). However, Pt MNPs showed no catalytic activity. Standard disc diffusion method was used to evaluate the NPs toxicity towards Escherichia coli and Staphylococcus aureus, which showed no inhibitory zones. NPs showed less toxicity compared to potassium dichromate (control) against Artemia nauplii. Among the NPs studied, Pt-Pd (1:1) BNPs showed less toxicity with 100% mortality only at 100 µg/mL concentration followed by Pt MNPs (≥ 80 µg/mL), Pt-Pd (1:3) BNPs (≥ 60 µg/mL), Pt-Pd (3:1) BNPs (≥ 60 µg/mL) and Pd MNPs (≥ 40 µg/mL) after 72 h exposure. These evaluations support the application of bio-fabricated Pt-Pd BNPs as nano-catalysts in textile dyes degradation. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s13205-021-02935-0.

Assessment of properties, applications and limitations of scaffolds based on cellulose and its derivatives for cartilage tissue engineering: A review.

Cartilage is a connective tissue, which is made up of ~80% of water. It is alymphatic, aneural and avascular with only one type of cells present, chondrocytes. They constitute about 1-5% of the entire cartilage tissue. It has a very limited capacity for spontaneous repair. Articular cartilage defects are quite common due to trauma, injury or aging and these defects eventually lead to osteoarthritis, affecting the daily activities. Tissue engineering (TE) is a promising strategy for the regeneration of articular cartilage when compared to the existing invasive treatment strategies. Cellulose is the most abundant natural polymer and has desirable properties for the development of a scaffold, which can be used for the regeneration of cartilage. This review discusses about (i) the basic science behind cartilage TE and the study of cellulose properties that can be exploited for the construction of the engineered scaffold with desired properties for cartilage tissue regeneration, (ii) about the requirement of scaffolds properties, fabrication mechanisms and assessment of cellulose based scaffolds, (iii) details about the modification of cellulose surface by employing various chemical approaches for the production of cellulose derivatives with enhanced characteristics and (iv) limitations and future research prospects of cartilage TE.

Novel buffalo rumen metagenome derived acidic cellulase Cel-3.1 cloning, characterization, and its application in saccharifying rice straw and corncob biomass.

Lignocellulosic biomass (LCB) is a prominent option for second-generation biofuels production. Cellulase hydrolyses cellulose, a component of LCB by attacking the ß-1,4-glycosidic bonds, thus liberating mono, di, and oligosaccharides, which subsequently, can be converted to biofuel. In this study, a novel cellulase (Cel-3.1) of 1593 bp which encodes a 530 amino acid protein was identified from buffalo rumen metagenomic fosmid library, and functional expression was achieved through transformation into Escherichia coli. The molecular weight was estimated as 58 kDa on SDS-PAGE. Cel-3.1 belongs to glycosyl hydrolase family-5 (GH-5) and is predicted to have 14 α-helices and 15 ß-strands. The optimal temperature and pH for Cel-3.1 were experimentally determined as 5.0 and 50 °C respectively. The synergistic effect of Ca2+ with K+ ions improved Cel-3.1 activity significantly (25%) and 1% Polyethylene Glycol (PEG-400), 1% ß-mercaptoethanol enhanced the relative activity Cel-3.1 by 31.68%, 12.03% respectively. Further, the enzymatic (Cel-3.1) hydrolysis of pretreated rice straw and corncob released 13.41 ± 0.26 mg/mL and 15.04 ± 0.08 mg/mL reducing sugars respectively. High Performance Liquid Chromatography (HPLC), Scanning Electron Microscope (SEM), and Fourier Transformation Infrared spectroscopy (FTIR) analysis revealed the capability of Cel-3.1 for the breakdown and hydrolysis of both rice straw and corncob to generate various fermentable sugars.